HIV Protocols

by ; ;
Edition: 2nd
Format: Hardcover
Pub. Date: 2008-12-05
Publisher(s): Humana Pr Inc
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Summary

Despite major advances in HIV treatment, many areas require more study, in order to create efficacious, potent antiretrovirals that can suppress viral load completely and durably without toxic side effects, to define unknown drug targets and fine-tune known targets, and to better understand the interplay between viral and host factors. In "HIV Protocols, Second Edition", expert researchers provide clear, state-of-the-art methods for the study of HIV. Directed toward three specific goals, this text aims to document up-to-date protocols for select aspects of HIV biology, to bring together both virological and immunological approaches in a single, convenient volume, and to present a comprehensive account of a range of techniques not available in any existing HIV protocol book. As a volume in the highly successful Methods in Molecular Biology'„¢ series, the chapters include brief introductions to the subject, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and Notes sections containing priceless tips on troubleshooting and avoiding known pitfalls.Comprehensive and cutting-edge, "HIV Protocols, Second Edition" is an ideal guide to the wide array of techniques used in fundamental or applied research into the biology and pathogenesis of HIV-1.

Table of Contents

Preparation of Virus Particles and Their Analysis
Methods for Viral RNA Isolation and PCR Amplification for Sequencing of Near Full-Length HIV-1
Purification of HIV-1 Virions by Subtilisin Digestion or CD45 Immunoaffinity Depletion for Biochemical Studies
Calculating HIV-1 Infectious Titer Using a Virtual TCID50 Method
Methods to Study HIV-1 Replication
Early Events
Cell-free Assays for HIV-1 UncoatingChristopher Aiken
Real-Time PCR Analysis of HIV-1 Replication Post Entry Events
Analysis of 2-LTR Circle Junctions of Viral DNA in Infected Cells
HIV-1 Recombination: An Experimental Assay and a Phylogenetic Approach
Methods of Preparation and Analysis of Intracellular Reverse Transcription Complexes
Analysis of Viral and Cellular Proteins in HIV-1 Reverse Transcription Complexes by Co-immunoprecipitation
Isolation and Analysis of HIV-1 Preintegration Complexes
Bisarsenical Labeling of HIV-1 for Real-Time Fluorescence Microscopy
Late Events
Methods for the Study of HIV-1 Assembly
Assembly of Immature HIV-1 Capsids using a Cell-Free System
Preparation of Recombinant HIV-1 Gag Protein and Assembly of Virus-like Particles in vitro
Methods for the Analysis of HIV-1 Nucleocapsid Protein Interactions with Oligonucleotides
Methods for Analysis of Incorporation and Annealing of tRNALys in HIV-1
Specialized Approaches to Study HIV-1 Biology and Pathogenesis
Somatic Cell Genetic Analysis to Identify HIV-1 Host Restriction Factors
Rapid, Controlled and Intensive Lentiviral Vector-based RNAi
Reverse Two Hybrid Screening to Analyze Protein-protein Interaction of HIV-1 and Cellular Proteins
Methods to Study Monocyte migration induced by HIV-infected cells
Novel Mouse Models for Understanding HIV-1 Pathogenesis
Immunological Studies of HIV
Mucosal Immunology
Mucosal Antibody Responses to HIV
Isolating Mucosal Lymphocytes from Biopsy Tissue for Cellular Immunology Assays
Measuring T cell Responses via Flow Cytometry
Quantifying HIV-1-specific CD8+ T-cell Responses Using ELISPOT and Cytokine Flow Cytometry
Multiparameter Flow Cytometry Monitoring of T cell Responses
Antiviral Responses
Measuring HIV Neutralization in a Luciferase Reporter Gene Assay
Assessing the Antiviral Activity of HIV-1-specific cytotoxic T lymphocytes
Methods for Quantitating Antigen-specific T Cell Responses Using Functional Assays in Rhesus Macaques
Isolation of Drug-Resistant Mutant HIV Variants Using Tissue Culture Drug Selection
Virus Evolution as a Tool to Study HIV-1 Biology
Table of Contents provided by Publisher. All Rights Reserved.

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